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Mail Address:
Suite B-7
3400 Research Forest Drive
The Woodlands, TX  77381 USA
Telephone:  281-419-0052
Facsimile:  281-419-0082

2005 PAS Annual Meeting
May 14 – 17
Washington, DC
 

Basic Science/Translational

Back to Track Index
Daily Expanded Schedule
Alliance Programs
 

  

Last updated February 4, 2005


Saturday, MAY 14

8:00am–11:00am
4102—Imaging of the Developing Organism: Tools for the Developmental Biologist
PAS Mini Course
Chair: Colin K.L. Phoon, New York University School of Medicine, New York, NY

Rapid advances in developmental genetics over the past decade have led to the generation of myriad animal models of abnormal development and the elucidation of many genes involved in development. Phenotypic analysis has traditionally been limited to histological or in vitro techniques. Innovations in sophisticated imaging modalities now allow investigators to see the results of genetic manipulation in striking detail, including in vivo imaging of the embryo, three-dimensional reconstruction of embryonic structures and functional analysis of the cardiovascular system. Such imaging tools will prove invaluable in linking genomic processes with their phenotypic manifestations. Multi-modality, non-redundant imaging can help investigators answer key biological questions. This state of the art mini course is designed to provide investigators specializing in developmental processes with an overview of several current innovative imaging approaches for the study of the embryonic and early postnatal organism and to stimulate collaboration as well as advances in phenotypic analyses.

Target Audience: Scientists involved in basic developmental biology research from various fields, including cardiology, neurology, cell biology, developmental biology (patterning, etc.) and genetics.

Introduction: What Can Advanced Imaging Do for the Developmental Biologist?
Colin K.L. Phoon, New York University School of Medicine, New York, NY

In Vivo Ultrasound and MR Microimaging of Mouse Brain Development
Daniel H. Turnbull, Skirball Institute of Biomolecular Medicine, New York University School of Medicine, New York, NY

Optical Projection Tomography: A New Approach for 3D Microscopy and Gene Expression
James Sharpe, MRC Human Genetics Unit, Western General Hospital, Edinburgh, United Kingdom

Quantifying Developmental Dynamics Using DPIV
Jay R. Hove, Genome Research Institute, University of Cincinnati, Cincinnati, OH

Break

Dynamic Imaging of Fluid Forces and Heart Motions in Developing Embryos
Mary E. Dickinson, California Institute of Technology, Beckman Institute, Pasadena, CA

Mapping Cardiac Excitation in Embryonic and Adult Hearts
Gregory E. Morley, New York University School of Medicine, New York, NY

Panel Discussion and Question & Answer
 
 

11:45am–2:45pm
4501—Fish, Worms and Flies
PAS Mini Course
Chair: Edward R.B. McCabe, Mattel Children's Hospital at UCLA, Los Angeles, CA

One of the most important lessons of the Human Genome Project is how similar we are to the organisms that surround us. The similarities between our biology and theirs means that they truly are models from which we learn more about ourselves and our diseases. In this mini course, we will see how the fruit fly, Drosophila melanogaster, can be used to identify drugs for human diseases. We will learn how the nematode worm, Caenorhabditis elegans, can be used to investigate signaling pathways that are preserved from worms to humans and are critical to committing undifferentiated cells to differentiate correctly. The zebrafish, Danio rerio, provides us with a vertebrate model for studying organ systems similar to our own. The presenters will provide a general overview of their organism and then an in-depth description of their research.

Target Audience: Investigators involved with or interested in learning about research involving model organisms. Appeal will be the strengths of these non-mammalian models for investigations ranging from developmental biology to high-throughput drug screens.

Overview of Non-mammalian Model Organisms
Edward R.B. McCabe, Mattel Children's Hospital at UCLA, Los Angeles, CA

Flies: Identifying New Drugs for Human Diseases
Juan Botas, Baylor College of Medicine, Houston, TX

Worms: Signal Transduction and Cellular Differentiation
David M. Eisenmann, University of Maryland, Baltimore, MD

Fish: Developmental Genetics of the Heart
Didier Stainier, University of California, San Francisco, CA

Discussion

Sponsored jointly by the AAP Section on Cardiology and the Pediatric Academic Societies
 

1:00pm–3:00pm
4652—Neonatal Infectious Disease and Inflammation
PAS Original Science Abstracts - Platform Session

1:00pm–3:00pm
4654—Pulmonary Vascular Biology
PAS Original Science Abstracts - Poster Symposium

3:15pm–5:15pm
4840—Animal Models of Cardiac Diseases
PAS Original Science Abstracts - Platform Session

3:15pm–5:15pm
4842—Fetal Origins of Adult Disease
PAS Original Science Abstracts - Poster Symposium

3:15pm–5:15pm
4843—Gastroenterology
PAS Original Science Abstracts - Platform Session

3:15pm–5:15pm
4851—Pathogenesis of Bronchopulmonary Dysplasia
PAS Original Science Abstracts - Platform Session

3:15pm–5:15pm
4871—Cell Biology Methods
PAS Educational Workshop
Leader: Kathleen Sakamoto, Los Angeles, CA

Recent advances in molecular and cellular techniques have provided new approaches to studying the role of gene function in a variety of human diseases. It is critical for Pediatricians and Pediatric subspecialists to understand the basis and use of these emerging technologies. This workshop will provide an overview of new cell biology methods that are currently being used. The topics include RNA interference, purification of stem cells, microarray analysis and gene profiling and approaches to flow cytometry. Upon completion of this workshop, participants will be able to describe (a) design and application of siRNA and shRNA, (b) approaches to stem cell purification, (c) application of gene profiling/expression arrays, and (d) uses of FACs analysis.
 

Sunday, MAY 15

8:00am–10:00am
5104—Whole Genome Investigation To Identify Susceptibility Genes
PAS Topic Symposium
Chairs: Diana W. Bianchi, Tufts-New England Medical Center, Boston, MA and Eric P. Hoffman, Children's National Medical Center, Washington, DC

With the completion of the human genome, new tools are now available to identify the genetic determinants for complex pediatric disorders. This symposium will introduce these new tools and discuss how they are being applied to three critically important clinical issues in pediatrics. First, the use of the HapMap and other recent advances in whole genome association studies will be reviewed. Second, the pursuit of susceptibility genes relevant to drug responsiveness will be presented in the realm of pediatric organ transplantation. Third, the identification of susceptibility genes for reading disability will be discussed.

Finally, the genetics of neurodevelopmental disorders will be highlighted. The next layer of fundamental understanding of complex disorders in pediatrics will depend heavily on such strategies, and this symposium will relay the matching high levels of excitement and rigor with which these pursuits should go forth.

Whole Genome Association Studies for Complex Traits and Diseases: Role of the HapMap and Other Recent Advances
Joel N. Hirschhorn, Children's Hospital, Boston, MA

Genetic Contribution to Graft and Patient Outcomes After Solid Organ Transplantation
Steven A. Webber, University of Pittsburgh School of Medicine, Pittsburgh, PA

Identifying Susceptibility Genes for Reading Disability
Jeffrey R. Gruen, Yale University School of Medicine, New Haven, CT

The Genetics of Neurodevelopmental Disorders
Anthony P. Monaco, University of Oxford, Oxford, England
 

8:00am–10:00am
5146—Neonatal CNS Injury
PAS Original Science Abstracts - Platform Session

8:00am–10:00am
5150—Vascular Mediators in Persistent Pulmonary Hypertension
PAS Original Science Abstracts - Platform Session

8:00am–11:00am
5239—Transgenic and Gene Knockout Methods in Mice
PAS Educational Workshop
Leader: Louis Muglia, St. Louis, MO; Co-leader: Scott Saunders

Genetic analyses in mice provide a powerful approach to understanding fundamental areas of interest in pediatrics. Transgenic and gene knockout model systems in mice have advanced our understanding of developmental, physiological and cognitive processes difficult to dissect mechanistically in either lower organisms or humans. In this workshop, a practical framework for the design and production of genetically altered mice will be presented. Discussion will begin with availability of resources for DNA analysis and clone acquisition and progress through consideration of construct production for pronuclear injection or introduction into embryonic stem cells. Limitations in interpretation of findings obtained in conventional transgenic or knockout animals will be reviewed, and methods to overcome these limitations with conditional knockouts or inducible transgenes will be presented.
 

2:00pm–4:00pm
5521—Regulation of Alveolar Epithelial Repair—or, How Do We Put It All Back Together Again
PAS Topic Symposium
Chairs: Rita Ryan, State University of New York at Buffalo, Women and Children's Hospital of Buffalo, Buffalo, NY; and Heber Nielsen, Tufts University School of Medicine, Tufts-New England Medical Center, Boston, MA

Regulation of alveolar epithelial repair after many forms of lung injury remains incompletely understood. The type II cell is an important source of growth factors and there are autocrine and paracrine mediators that are altered during the repair process. Type I cells are the primary covering of the alveolar epithelium, and their restoration is critical to recapitulate normal repair. This symposium will focus on the fundamental mechanisms of epithelial repair after injury and examine connections with lung development. Finally, relevance to current clinical disease will be discussed.

Target Audience: Physician and basic scientists interested in how the alveolar epithelium repairs itself after injury and the relationship of lung repair with lung development.

Introduction
Rita M. Ryan, State University of New York at Buffalo, Women and Children's Hospital of Buffalo, Buffalo, NY
Heber C. Nielsen, Tufts New England Medical Center, Boston, MA

Type II Cell Mitogens
Timothy D. Le Cras, Cincinnati Children's Hospital Medical Center, Cincinnati, OH

Type II Cell Proliferation During Lung Injury and Repair
Michael A. O'Reilly, University of Rochester, Rochester, NY

Type I Cells in Alveolar Repair
Susan H. Guttentag, Children's Hospital of Philadelphia, Philadelphia, PA

Apoptosis in Alveolar Epithelial Repair
Lin L. Mantell, Institute for Medical Research at North Shore-Long Island Jewish, New York University School of Medicine, Manhasset, NY

Translating Alveolar Epithelial Repair Fundamentals to the Bedside
John S. Torday, Los Angeles Biomedical Research Institute at Harbor-UCLA Medical Center, Torrance, CA
 

2:00pm–5:00pm
5595—Proteomic Approaches to Diseases
SPR Special Interest Group
Chairs: James Schilling, Department of Pediatrics, Stanford University School of Medicine, Stanford, CA; and Anne Murphy, Johns Hopkins University School of Medicine, Baltimore, MD

Proteomics is a rapidly evolving discipline that has the potential to provide insights into fundamental biology of disease and deliver clinically useful biomarkers. This session will focus on the application of different proteomic technologies in diverse diseases and demonstrate the impact proteomics can make.

Target Audience: Scientists and clinicians interested in using newly emerging proteomics methods for the elucidation of disease mechanisms and biomarker discovery.

Serum Proteomics and Biomarkers in Cardiovascular Diseases
Jennifer Van Eyk, Johns Hopkins School of Medicine, Bayview Proteomics Center, Baltimore, MD

Application of Proteomics to Cystic Fibrosis
Harvey B. Pollard, Uniform Health Services University, Bethesda, MD

Autoimmune Diseases and Protein Arrays
P.J. Utz, Stanford University Proteomics Center, Stanford, CA

Panel Discussion: Speakers and Session Chairs
Discussion

Sponsored by the Society for Pediatric Research
 

4:15pm–5:45pm
5703—Stem Cell Therapies: What's On the Horizon for Pediatrics and Pediatric Diseases
PAS State of the Art Plenary
Chair: Stuart Orkin, Dana Farber Cancer Institute, Boston, MA

Stem cell-based approaches hold great promise for treating many of the tissue degenerative disorders that afflict our aging population. This symposium will explore the role of stem cell therapies in pediatric disorders due to inborn errors of metabolism and other single-gene defects. Furthermore, the symposium will discuss the implications of new data indicating that fetal cells in the maternal circulation can participate in maternal wound repair, implying that the fetus may be able to “treat” its mother.

Target Audience: Broad appeal for scientists and clinicians interested in new therapeutic approaches based on stem cell biology.

Stem Cell Therapy in Lysosomal Storage Disorders
Susan L. Staba, University of Florida, Gainesville, FL

Liver Repopulation with Stem Cells
Markus Grompe, Oregon Health & Science University, Portland, OR

Pregnancy-Associated Stem Cells: Does the Fetus "Treat" Its Mother?
Diana W. Bianchi, Tufts University School of Medicine, Floating Hospital for Children, Boston, MA

Summation and Perspectives
Stuart H. Orkin, Dana Farber Cancer Institute, Boston, MA
 

4:15pm–6:15pm
5743—Pediatric Nutrition and Metabolism
PAS Original Science Abstracts - Platform Session

 

Monday, MAY 16

8:00am–10:00am
6131—Brain Metabolism and Injury
PAS Original Science Abstracts - Platform Session

8:00am–10:00am
6132—Clinical Trials in Perinatal and Neonatal Medicine I
PAS Original Science Abstracts - Platform Session

8:00am–10:00am
6133—Development Biology
PAS Original Science Abstracts - Platform Session

8:00am–10:00am
6137—Infectious Diseases
PAS Original Science Abstracts - Platform Session

8:00am–10:00am
6140—Neonatal–Fetal Nutrition and Metabolism II
PAS Original Science Abstracts - Poster Symposium

9:00am–12:00pm
6205—Developmental and Molecular Imaging
PAS Educational Workshop
Leader: Colin K.L. Phoon, New York, NY; Co-leader: Christopher Contag

Advances in imaging now allow characterization of many developmental processes, particularly in the in vivo organism. This workshop is designed to introduce the audience to two such techniques: ultrasound biomicroscopy and biophotonic imaging, in detail. The emphasis is on practical aspects of imaging, with the opportunity for hands-on imaging and use of representative systems.
 

3:00pm–5:00pm
6730—Cardiac and Pulmonary Development
PAS Original Science Abstracts - Platform Session

3:00pm–5:00pm
6732—Neonatal Hyperoxia and the Lung
PAS Original Science Abstracts - Platform Session

3:00pm–5:00pm
6760—Functional Genomics
PAS Educational Workshop
Leader: Clifford W. Bogue, New Haven, CT; Co-leaders: James D. Bristow and Cecilia Lo

Understanding the function of genes and other parts of the genome is known as functional genomics. The Human Genome Project is just the first step in understanding humans at the molecular level. Now that the sequencing phase of the human and mouse genomes is complete, many questions remain unanswered, including the function and regulation of most of the estimated 30,000-35,000 mouse and human genes. The mouse has a long and rich history in biological research and many consider it a model organism for the study of human development and disease. Over the past few years, exciting progress has been made in developing techniques for chromosome engineering, mutagenesis, mapping and maintenance of mutations and identification of mutant genes in the mouse. Additionally, whole genome sequence analysis of many different species is proving to be incredibly fruitful in identifying critical gene regulatory motifs. In this workshop, we will present some of the techniques that are being applied to the daunting yet exciting task of functional genomic analysis in the mouse.

Objectives:

  1. To learn about contemporary scientific techniques currently in use to determine the function of the genome.
  2. To learn how the genomic sequence of various organisms can be used to determine gene function.

Method of Instruction: Three lectures with question-and-answer sessions.

Target Audience: Trainee, junior faculty, mid-level faculty, senior faculty.
 

3:00pm–5:00pm
6762—Grant Writing
PAS Educational Workshop
Leader: William Hay, Denver, CO

The purpose of this workshop is to review the most successful methods for writing a grant application. NIH grant applications will be emphasized and used for illustrations, but the format will be general enough to apply to other granting agency applications. Specific topics will include: career timeline for different grants, organization of the application, items to include in each section of the grant, budget requirements, writing hints, resubmission strategies, how to write the application to meet study section reviewer criteria, common successes and common mistakes in writing applications. A handout of the Powerpoint figures used in Dr. Hay's talk will be available. There will be ample time for general and personal questions from the attendees.
 

3:00pm–5:00pm
6764—NICHD: How It Works and Opportunities for Research Support
PAS Educational Workshop
Leader: Duane Alexander, Bethesda, MD; Co-leader: Linda Wright

This grantsmanship session will describe the process of applying for research support from the NIH, how review is done and funding decisions made and how to enhance the likelihood of success. Mechanisms available for support at various stages of a career will be reviewed, as well as current research topics of special interest to NICHD.

Objective:

  1. Areas of special current research interest to NICHD.

  2. Information on a variety of support mechanisms at different career stages and how NIH receives, assigns, reviews and funds applications for support of various types of research, training and career development.

Method of Instruction: Presentations followed by questions and answer.

Target Audience: Beginner.
 

3:00pm–5:00pm
6765—Translational Proteomics in Pediatric Investigations
PAS Educational Workshop
Leader: Asher D. Schachter, Boston, MA; Co-leader: Emanuel F. Petricoin

This workshop will provide an introduction and overview of cutting-edge techniques in proteomics, as applied to identifying non-invasive diagnostic and prognostic disease biomarkers. Workshop participants will (1) learn the basics of how this technology works, (2) see actual data from translational proteomics analysis of serum and urine, (3) learn the fundamentals of the analytical and informatic methods commonly used to interpret the data and (4) have the opportunity to ask questions and discuss certain topics of interest, such as pitfalls and limitations of these techniques. Upon completion of the workshop, participants will have a fundamental knowledge of translational proteomics.

Objectives:

  1. Attain knowledge of the fundamentals of proteomics.
  2. Understand the fundamentals of identifying biomarkers for clinical applications.

Method of Instruction: An interactive presentation followed by a question-and-answer period.

Target Audience: Trainee, junior faculty, mid-level faculty.
 

3:00pm–5:00pm
6766—Writing a Scientific Paper
PAS Educational Workshop
Leader: Kurt Albertine, Salt Lake City, UT

The goal of this workshop is to provide practical guidance for composing a manuscript. Emphasis is placed on planning, organizing and composing a clear scientific document. All parts of a manuscript will be discussed (Abstract, Introduction, Methods, Results, Discussion, References, Figures, Tables). Other topics will be journal selection, authorship and the review process. Questions to be addressed will include:

  1. What is the question asked, or hypothesis tested, by your study?
  2. Is the question or hypothesis stated clearly and explicitly?
  3. Are the methods suitable?
  4. Do the results (data) answer the question or address the hypothesis?
  5. Are the figures and tables clear?
  6. Are the figures and tables redundant?
  7. Is information included that is irrelevant to the purpose of the study?
  8. Are the statistics suitable?
  9. Are the references adequate?
  10. Does the discussion contain smokescreens, straw men or omit alternate theories or contrary evidence?
  11. Are limitations to the study discussed?
  12. What is the importance or significance of your study?
  13. Is the manuscript easy to read and prepared carefully?

Those planning to attend this workshop should obtain the following two (2) books, both of which are paperback.

  1. Zeiger M. Essentials of Writing Biomedical Research Papers. 2nd edition, McGraw Hill, Inc., NY, 2000. (ISBN 0-07-072833-X). (~$45)

  2. Briscoe MH. Preparing Scientific Illustrations. 2nd edition, Springer, NY, 1996. (ISBN 0-387-94581-4). (~$30)

Also, please bring a pad of writing paper and pencils/pens. Participants may bring a manuscript that they are currently composing. Please do not bring a published paper because published manuscripts cannot be revised.

A textbook reference list will be provided to participants
 

Tuesday, MAY 17

8:00am–10:00am
7157—Lung Maturation, Septation and Growth
PAS Original Science Abstracts - Platform Session

8:00am–10:00am
7158—Mechanisms of Childhood Lung Disease
PAS Original Science Abstracts - Platform Session

8:00am–10:00am
7159—Neonatal Neurology—Experimental Models
PAS Original Science Abstracts - Poster Symposium

10:15am–11:45am
7300—Children's Health and the Federal Government: Research and Public Health Policy
PAS State of the Art Plenary
Chairs: Lisa Guay-Woodford, President, Society for Pediatric Research; and Paul Young, Chair, PAS Program Committee

Elias A. Zerhouni, the Director of the NIH and Vice Admiral Richard H. Carmona, the Surgeon General of the United States, will provide PAS attendees with their views of the critical issues related to pediatric research and the health of our nation's children.

Target Audience: All attendees

Introduction
Paul C. Young, University of Utah School of Medicine, Salt Lake City, UT
Lisa M. Guay-Woodford, University of Alabama at Birmingham, Birmingham, AL

The NIH Roadmap for Medical Research
Elias A. Zerhouni, Director, National Institutes of Health, Bethesda, MD

Promoting Health for U.S. Children and Their Families
Vice Admiral Richard H. Carmona, Surgeon General of the United States, Washington, DC

Discussion

 

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Last Updated: September 26, 2006